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Hum. Reprod. Advance Access first published online on August 9, 2008
This version published online on September 24, 2008

Human Reproduction, doi:10.1093/humrep/den278
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© The Author 2008. Published by Oxford University Press on behalf of the European Society of Human Reproduction and Embryology. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org

A genome-wide linkage scan in a Dutch family identifies a premature ovarian failure susceptibility locus

R.A. Oldenburg1, M.F. van Dooren1, B. de Graaf1, E. Simons1, L. Govaerts1, S. Swagemakers2, J.M.H. Verkerk2, B.A. Oostra1 and A.M. Bertoli-Avella1,3

1 Department of Clinical Genetics, Erasmus Medical Center, PO Box 2040, 3000 CA Rotterdam, the Netherlands 2 Department of Bioinformatics, Erasmus Medical Center, Rotterdam, the Netherlands

3 Correspondence address. Tel: +31-10-7044628; Fax:+31-10-7044736; E-mail: a.bertoliavella{at}erasmusmc.nl

BACKGROUND: Premature ovarian failure (POF) is characterized by elevated gonadotrophins and amenorrhea before the age of 40 years and occurs approximately in 1% of women. POF etiology is highly heterogeneous with a wide spectrum of etiological pathogenic mechanisms including genetic causes. These mostly involve numerical, structural or monogenic defects on the X-chromosome. Mutations in a small number of autosomal genes (such as FOXL2 and NOBOX) have been identified as a cause of POF. However, in most cases, the disease underlying mechanisms are largely unknown.

METHODS: We performed a genome-wide linkage analysis in a relatively large Dutch family with seven patients suffering from POF, showing a dominant pattern of inheritance. A genome-wide analysis, using 50K single nucleotide polymorphism arrays, was combined with conventional parametric linkage analysis.

RESULTS: We identified three genomic regions on chromosomes 5, 14 and 18 yielding suggestive linkage (multipoint LOD score of 2.4 for each region). After inclusion of one elder unaffected family member, only the region on chromosome 5 remains as a putative POF locus. In addition, we investigated a second family (three living patients over three generations) for the regions on chromosome 5, 14 and 18. Haplotype analysis supported only the locus on chromosome 5q14.1–q15.

CONCLUSION: We performed the first genome-wide linkage search in familial POF and identified a region on chromosome 5q14.1–q15, which may harbor a novel POF susceptibility gene.

Key words: premature ovarian failure/linkage analysis/familial/SNPs/genome-wide search


This is a new version of this paper as Figure 4 has been corrected.

Submitted on February 15, 2008; resubmitted on April 4, 2008; accepted on April 17, 2008.


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